Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904978.1_cds_XP_016455129.1_49074
CDS Infomation

[gene=LOC107779247] [db_xref=GeneID:107779247] [protein=glucan endo-1,3-beta-glucosidase, acidic-like] [protein_id=XP_016455129.1] [location=complement(82151..83413)] [gbkey=CDS]
Sequence

ATGAATAATAAAGTAAGCAAAAATTTCACTCCAAGACCTCACGTTTTCAAAATGCTTCCC
TCCTTCAAAACTCCCCTTCTCTCTCTCTTCATCCTCTCTCTCTTACTCTCCCCTTCCGCC
GCCGTACCAACCACCACTGTCGGCTTCACCTACTCCCCTGCTCCCAACTCTCCACCGCCG
GAGCACGTCGTCACCGCCCTTCAGTCACTCAAAATCCCAGCCGTACGCCTCCTTAATCCC
AGCCCTACGTTAGTCCGAGCATTTTCCTACTCCAACATCTCTCTTCTCCTCACCGTCCCC
AACTACCTCGTTGGCTCCTTCGCTTCCAATCGCTCCGCCGCTACTCTCTGGGTTTACAAC
AATGTGCTTCCGTTTCATCCTCGTGCTCGTATTTCGCTCATCTCCGTCGGTTCCGACGTC
ATCACTTCCCCTACTTCCGGCGGTTCTGACCCTTCCGCTGCCGTAGTCCCCGCCATGCAA
AACTTGCACCGCGCATTGAACGACCTCGGAATTCGCACCGTCTCAGTTTCCACTACTTTC
TCCTTCATCAACGTGATTACGACGGCGTTTCCTCCTTCCTCCGCCGAGTTCCAGGAGCCG
GTCAGCTCGCTAATCATCAGGCCTGTGCTTCAGTTTTTGGAGGAAACTAACTCGTCTCTC
CTGGTGAATGTGTATCCGTACAATGTTTATAGGCTCCACGGAGAGATTCCAGTCGGTTTC
GCTCTGTTTCAGGAAGGCCCGTTCAACTTTCGTGATGACGTTGTTACGGCCGTTCGTTAT
CATAACCTGTTTGATATGATGATTGATGCCGTGATTGCTGCCATGGCGGTTAGCGGTTAC
GAGAATGTTCCGTTAATTGTGACGGAAACAGGGTGGCCAAGCGATGGAAGCAACTATGAG
CATGTGAATAATGGTGTAAGGGATGCAGAGGAGAGCCAGCTGTACGCGGAGATGTATTTA
CAGGGGCTGGTTTCGCATTTGAAATCTGGACTTGGAACTCCGCTGAGGAAGGAAGGAGTT
TCTGAGGCTTACATTTACCAGTTGTTTGATGAAAGTGAAACGAAGCAGCAGAGCAATTTG
AGTAGTGCTCAAGGTGAAATTACAGGGCAGTACTGGGGAGTGATGTACACCAACATGAGC
ATGAAGTACAACATCAATTTTGACAGTGCTGATCGGAATTCGAGAAAGCTTGGTGTACTT
GTTCCCTCAATTCATCTTCTGTGGCTTCTTTCTATGCTTGTTCTAGCTTCATCGCTCTCA
TGA

Peptide Sequence

PEP ID

XP_016455129.1
PEP Infomation

PREDICTED: glucan endo-1,3-beta-glucosidase, acidic-like [Nicotiana tabacum]
Sequence

MNNKVSKNFTPRPHVFKMLPSFKTPLLSLFILSLLLSPSAAVPTTTVGFTYSPAPNSPPP
EHVVTALQSLKIPAVRLLNPSPTLVRAFSYSNISLLLTVPNYLVGSFASNRSAATLWVYN
NVLPFHPRARISLISVGSDVITSPTSGGSDPSAAVVPAMQNLHRALNDLGIRTVSVSTTF
SFINVITTAFPPSSAEFQEPVSSLIIRPVLQFLEETNSSLLVNVYPYNVYRLHGEIPVGF
ALFQEGPFNFRDDVVTAVRYHNLFDMMIDAVIAAMAVSGYENVPLIVTETGWPSDGSNYE
HVNNGVRDAEESQLYAEMYLQGLVSHLKSGLGTPLRKEGVSEAYIYQLFDESETKQQSNL
SSAQGEITGQYWGVMYTNMSMKYNINFDSADRNSRKLGVLVPSIHLLWLLSMLVLASSLS

Transcript Sequence

Gene sequence data has not been registered.